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Databases/Tools

Find molecular databases and software tools with a combined search of the
HSLS Online Bioinformatics Resource Collection (OBRC) and the BioMed Central Databases collection.
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Articles on Databases/Tools

Find journal articles specifically on molecular databases and software tools using a filtered PubMed search.
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Genes/Proteins

Find information on genes and proteins with a combined search of NCBI Entrez Gene and the BIOBASE Knowledge Library*.
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Pathways

Find information on metabolic and signaling pathways with a combined search of NCBI BioSystems,
the Protein Lounge Pathway Database* and the Science STKE Database of Cell Signaling*.

Web

Find information on the Web using Clusty, the results clustering search engine.
Results 1-20 of about 103|
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  1. SNP@Evolution: a hierarchical database of positive selection on the human genome.
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    Issn: 1471-2148
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    Volume: 9
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    Date: 2009
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    Journal: BMC Evol Biol. 2009;9
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    Authors: Cheng F, Chen W, Richards E[...]
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  2. Current software for genotype imputation.
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    Issn: 1479-7364
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    Volume: 3
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    Issue: 4
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    Date: 2009 Jul
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    Journal: Hum Genomics. 2009 Jul;3(4)
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    Authors: Ellinghaus D, Schreiber S, Franke A[...]
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  3. On quality control measures in genome-wide association studies: a test to assess the genotyping quality of individual probands in family-based association studies and an application to the HapMap data.
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    Issn: 1553-7404
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    Volume: 5
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    Issue: 7
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    Date: 2009 Jul
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    Journal: PLoS Genet. 2009 Jul;5(7)
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    Authors: Fardo DW, Ionita-Laza I, Lange C
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  4. LD2SNPing: linkage disequilibrium plotter and RFLP enzyme mining for tag SNPs.
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    Issn: 1471-2156
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    Volume: 10
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    Date: 2009
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    Journal: BMC Genet. 2009;10
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    Authors: Chang HW, Chuang LY, Chang YJ[...]
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  5. Data structures and compression algorithms for genomic sequence data.
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    Issn: 1367-4811
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    Volume: 25
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    Issue: 14
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    Date: 2009 Jul 15
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    Journal: Bioinformatics. 2009 Jul 15;25(14)
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    Authors: Brandon MC, Wallace DC, Baldi P
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  6. High-resolution haplotype block structure in the cattle genome.
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    Issn: 1471-2156
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    Volume: 10
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    Date: 2009
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    Journal: BMC Genet. 2009;10
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    Authors: Villa-Angulo R, Matukumalli LK, Gill CA[...]
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  7. Statistical comparison framework and visualization scheme for ranking-based algorithms in high-throughput genome-wide studies.
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    Issn: 1557-8666
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    Volume: 16
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    Issue: 4
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    Date: 2009 Apr
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    Journal: J Comput Biol. 2009 Apr;16(4)
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    Authors: Tembe WD, Pearson JV, Homer N[...]
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  8. Data structures and algorithms for analysis of genetics of gene expression with Bioconductor: GGtools 3.x.
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    Issn: 1367-4811
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    Volume: 25
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    Issue: 11
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    Date: 2009 Jun 1
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    Journal: Bioinformatics. 2009 Jun 1;25(11)
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    Authors: Carey VJ, Davis AR, Lawrence MF[...]
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  9. IGG3: a tool to rapidly integrate large genotype datasets for whole-genome imputation and individual-level meta-analysis.
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    Issn: 1367-4811
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    Volume: 25
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    Issue: 11
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    Date: 2009 Jun 1
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    Journal: Bioinformatics. 2009 Jun 1;25(11)
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    Authors: Li MX, Jiang L, Kao PY[...]
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  10. Joint estimation of copy number variation and reference intensities on multiple DNA arrays using GADA.
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    Issn: 1367-4811
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    Volume: 25
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    Issue: 10
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    Date: 2009 May 15
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    Journal: Bioinformatics. 2009 May 15;25(10)
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    Authors: Pique-Regi R, Ortega A, Asgharzadeh S
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  11. Interpreting genetics of gene expression: integrative architecture in Bioconductor.
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    Issn: 1793-5091
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    Date: 2009
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    Journal: Pac Symp Biocomput. 2009
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    Authors: Carey VJ, Gentleman R
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  12. Use of weighted reference panels based on empirical estimates of ancestry for capturing untyped variation.
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    Issn: 1432-1203
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    Volume: 125
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    Issue: 3
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    Date: 2009 Apr
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    Journal: Hum Genet. 2009 Apr;125(3)
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    Authors: Egyud MR, Gajdos ZK, Butler JL[...]
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  13. Learning a prior on regulatory potential from eQTL data.
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    Issn: 1553-7404
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    Volume: 5
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    Issue: 1
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    Date: 2009 Jan
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    Journal: PLoS Genet. 2009 Jan;5(1)
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    Authors: Lee SI, Dudley AM, Drubin D[...]
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  14. AssociationViewer: a scalable and integrated software tool for visualization of large-scale variation data in genomic context.
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    Issn: 1367-4811
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    Volume: 25
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    Issue: 5
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    Date: 2009 Mar 1
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    Journal: Bioinformatics. 2009 Mar 1;25(5)
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    Authors: Martin O, Valsesia A, Telenti A[...]
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  15. BioMart--biological queries made easy.
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    Issn: 1471-2164
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    Volume: 10
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    Date: 2009
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    Journal: BMC Genomics. 2009;10
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    Authors: Smedley D, Haider S, Ballester B[...]
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  16. Estimating population haplotype frequencies from pooled DNA samples using PHASE algorithm.
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    Issn: 1469-5073
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    Volume: 90
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    Issue: 6
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    Date: 2008 Dec
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    Journal: Genet Res. 2008 Dec;90(6)
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    Authors: Pirinen M, Kulathinal S, Gasbarra D[...]
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  17. OpenADAM: an open source genome-wide association data management system for Affymetrix SNP arrays.
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    Issn: 1471-2164
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    Volume: 9
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    Date: 2008
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    Journal: BMC Genomics. 2008;9
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    Authors: Yeung JM, Sham PC, Chan AS[...]
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  18. SNPnexus: a web database for functional annotation of newly discovered and public domain single nucleotide polymorphisms.
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    Issn: 1367-4811
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    Volume: 25
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    Issue: 5
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    Date: 2009 Mar 1
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    Journal: Bioinformatics. 2009 Mar 1;25(5)
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    Authors: Chelala C, Khan A, Lemoine NR
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  19. A comprehensive evaluation of SNP genotype imputation.
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    Issn: 1432-1203
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    Volume: 125
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    Issue: 2
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    Date: 2009 Mar
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    Journal: Hum Genet. 2009 Mar;125(2)
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    Authors: Nothnagel M, Ellinghaus D, Schreiber S[...]
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  20. Prediction of disease-associated single nucleotide polymorphisms using virtual genomes constructed from a public haplotype database.
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    Issn: 0026-1270
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    Volume: 47
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    Issue: 6
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    Date: 2008
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    Journal: Methods Inf Med. 2008;47(6)
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    Authors: Toyabe S, Miyashita A, Kitamura N[...]
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