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Databases/Tools

Find molecular databases & software tools with a combined search of the HSLS
Online Bioinformatics Resource Collection (OBRC) & the BioMed Central Databases collection.

Articles on Databases/Tools

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  1. The MPI Bioinformatics Toolkit for protein sequence analysis
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    Conduct protein sequence and structure analysis using a suite of software tools.
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    Find Articles Citing This Tool:
    OBRC
  2. YRC PDR (Yeast Resource Center Public Data Repository)new windowpreview
    Experimental data produced from many collaborations studying Saccharomyces cerevisiae. The data includes large amounts of mass spectrometry results from protein co-purification experiments, yeast two-hybrid interaction experiments, fluorescence microscopy images and protein structure prediction.
    Subject Areas: Bioinformatics, Genetics, Microbiology, Genomics, Proteomics
    Content: Organism, Gene, Protein, Links to other sources, Computationally generated, Experimental Data, Images
    BioMed Central Databases
  3. The PredictProtein server
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    Predict protein structure and function based on protein sequence.
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    Find Articles Citing This Tool:
    OBRC
  4. DictyDB (An ACeDB Database for Dictyostelium)new windowpreview
    A resource for examination and manipulation of Dictyostelium genetic information and a tool for prediction and representation of biochemical pathway and genetic network information.
    Subject Areas: Genomics, Bioinformatics
    Content: DNA, Protein, Organism, Curated, Sequence, Structure, Interaction
    BioMed Central Databases
  5. HUNT -- a full-length cDNA database from the Helix Research Institute
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    Search for information about human full-length cDNA sequences with annotation from sequence analysis and structure predictions.
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    Find Articles Citing This Tool:
    OBRC
  6. Snake Neurotoxin Databasenew windowpreview
    A database of snake venom neurotoxins, classified according to structural, functional, and phylogenetic properties. The website also contains an annotation tool to aid functional prediction of newly identified neurotoxins.
    Subject Areas: Neuroscience, Structural biology, Biochemistry
    Content: Protein, Phylogeny, Sequence, Structure
    BioMed Central Databases
  7. PROFEAT -- a web server for computing structural and physicochemical features of proteins and peptides from amino acid ...
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    Compute commonly-used structural and physicochemical features of proteins and peptides from amino acid sequence.
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    OBRC
  8. Integrated databanks access and sequence/structure analysis services at the PBIL
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    Access to sequence databanks and to many tools of nucleic acid and protein sequence analyses.
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    Find Articles Citing This Tool:
    OBRC
  9. GDAP -- A Web Tool for Genome-wide Protein Disulfide Bond Prediction
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    Predict protein disulfide bonds in protein sequences.
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    OBRC
  10. Web-based toolkits for topology prediction of transmembrane helical proteins, fold recognition, structure and binding ...
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    Use several Web servers to conduct various protein modeling and protein structure analysis.
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    Find Articles Citing This Tool:
    OBRC
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