search.HSLS.MolBio About search.HSLS.MolBio

Databases/Tools

Find molecular databases and software tools with a combined search of the
HSLS Online Bioinformatics Resource Collection (OBRC) and the BioMed Central Databases collection.
Guided Tour

Articles on Databases/Tools

Find journal articles specifically on molecular databases and software tools using a filtered PubMed search.
Guided Tour

Genes/Proteins

Find information on genes and proteins with a combined search of NCBI Entrez Gene and the BIOBASE Knowledge Library*.
Guided Tour

Pathways

Find information on metabolic and signaling pathways with a combined search of NCBI BioSystems,
the Protein Lounge Pathway Database* and the Science STKE Database of Cell Signaling*.

Web

Find information on the Web using Clusty, the results clustering search engine.
Results 1-20 of about 500|
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  1. Mapping the human membrane proteome: a majority of the human membrane proteins can be classified according to function and evolutionary origin.
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    Issn: 1741-7007
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    Volume: 7
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    Date: 2009
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    Journal: BMC Biol. 2009;7
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    Authors: Almén MS, Nordström KJ, Fredriksson R[...]
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  2. A top-down approach to enhance the power of predicting human protein subcellular localization: Hum-mPLoc 2.0.
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    Issn: 1096-0309
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    Volume: 394
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    Issue: 2
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    Date: 2009 Nov 15
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    Journal: Anal Biochem. 2009 Nov 15;394(2)
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    Authors: Shen HB, Chou KC
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  3. A tool for calculating binding-site residues on proteins from PDB structures.
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    Issn: 1472-6807
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    Volume: 9
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    Date: 2009
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    Journal: BMC Struct Biol. 2009;9
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    Authors: Hu J, Yan C
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  4. PCI-SS: MISO dynamic nonlinear protein secondary structure prediction.
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    Issn: 1471-2105
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    Volume: 10
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    Date: 2009
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    Journal: BMC Bioinformatics. 2009;10
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    Authors: Green JR, Korenberg MJ, Aboul-Magd MO
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  5. Dynamic programming algorithms and grammatical modeling for protein beta-sheet prediction.
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    Issn: 1557-8666
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    Volume: 16
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    Issue: 7
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    Date: 2009 Jul
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    Journal: J Comput Biol. 2009 Jul;16(7)
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    Authors: Kato Y, Akutsu T, Seki H
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  6. CheckShift improved: fast chemical shift reference correction with high accuracy.
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    Issn: 1573-5001
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    Volume: 44
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    Issue: 4
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    Date: 2009 Aug
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    Journal: J Biomol NMR. 2009 Aug;44(4)
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    Authors: Ginzinger SW, Skocibusić M, Heun V
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  7. Representative transcript sets for evaluating a translational initiation sites predictor.
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    Issn: 1471-2105
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    Volume: 10
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    Date: 2009
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    Journal: BMC Bioinformatics. 2009;10
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    Authors: Zeng J, Alhajj R, Demetrick DJ
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  8. Ab initio and homology based prediction of protein domains by recursive neural networks.
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    Issn: 1471-2105
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    Volume: 10
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    Date: 2009
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    Journal: BMC Bioinformatics. 2009;10
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    Authors: Walsh I, Martin AJ, Mooney C[...]
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  9. SOLpro: accurate sequence-based prediction of protein solubility.
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    Issn: 1367-4811
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    Volume: 25
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    Issue: 17
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    Date: 2009 Sep 1
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    Journal: Bioinformatics. 2009 Sep 1;25(17)
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    Authors: Magnan CN, Randall A, Baldi P
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  10. TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts.
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    Issn: 1573-5001
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    Volume: 44
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    Issue: 4
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    Date: 2009 Aug
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    Journal: J Biomol NMR. 2009 Aug;44(4)
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    Authors: Shen Y, Delaglio F, Cornilescu G[...]
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  11. SitePredicting the cleavage of proteinase substrates.
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    Issn: 0968-0004
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    Volume: 34
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    Issue: 7
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    Date: 2009 Jul
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    Journal: Trends Biochem Sci. 2009 Jul;34(7)
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    Authors: Verspurten J, Gevaert K, Declercq W[...]
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  12. Elucidating molecular overlays from pairwise alignments using a genetic algorithm.
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    Issn: 1549-9596
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    Volume: 49
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    Issue: 7
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    Date: 2009 Jul
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    Journal: J Chem Inf Model. 2009 Jul;49(7)
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    Authors: Jones G, Gao Y, Sage CR
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  13. Feature selection and classification employing hybrid ant colony optimization/random forest methodology.
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    Issn: 1875-5402
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    Volume: 12
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    Issue: 5
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    Date: 2009 Jun
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    Journal: Comb Chem High Throughput Screen. 2009 Jun;12(5)
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    Authors: Patil D, Raj R, Shingade P[...]
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  14. The applications of machine learning algorithms in the modeling of estrogen-like chemicals.
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    Issn: 1875-5402
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    Volume: 12
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    Issue: 5
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    Date: 2009 Jun
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    Journal: Comb Chem High Throughput Screen. 2009 Jun;12(5)
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    Authors: Liu H, Yao X, Gramatica P
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  15. Using DNA mechanics to predict in vitro nucleosome positions and formation energies.
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    Issn: 1362-4962
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    Volume: 37
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    Issue: 14
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    Date: 2009 Aug
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    Journal: Nucleic Acids Res. 2009 Aug;37(14)
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    Authors: Morozov AV, Fortney K, Gaykalova DA[...]
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  16. Fpocket: an open source platform for ligand pocket detection.
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    Issn: 1471-2105
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    Volume: 10
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    Date: 2009
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    Journal: BMC Bioinformatics. 2009;10
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    Authors: Le Guilloux V, Schmidtke P, Tuffery P
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  17. SAM-T08, HMM-based protein structure prediction.
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    Issn: 1362-4962
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    Volume: 37
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    Issue: Web Server issue
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    Date: 2009 Jul 1
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    Journal: Nucleic Acids Res. 2009 Jul 1;37(Web Server issue)
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    Authors: Karplus K
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  18. Transcriptome-wide prediction of miRNA targets in human and mouse using FASTH.
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    Issn: 1932-6203
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    Volume: 4
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    Issue: 5
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    Date: 2009
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    Journal: PLoS One. 2009;4(5)
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    Authors: Ragan C, Cloonan N, Grimmond SM[...]
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  19. Prediction of sub-cavity binding preferences using an adaptive physicochemical structure representation.
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    Issn: 1367-4811
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    Volume: 25
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    Issue: 12
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    Date: 2009 Jun 15
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    Journal: Bioinformatics. 2009 Jun 15;25(12)
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    Authors: Wallach I, Lilien RH
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  20. Pokefind: a novel topological filter for use with protein structure prediction.
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    Issn: 1367-4811
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    Volume: 25
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    Issue: 12
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    Date: 2009 Jun 15
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    Journal: Bioinformatics. 2009 Jun 15;25(12)
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    Authors: Khatib F, Rohl CA, Karplus K
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