search.HSLS.MolBio About search.HSLS.MolBio
Databases/ToolsFind molecular databases and software tools with a combined search of the
HSLS Online Bioinformatics Resource Collection (OBRC) and the BioMed Central Databases collection.
Articles on Databases/ToolsFind journal articles specifically on molecular databases and software tools using a filtered PubMed search.
Genes/ProteinsFind information on genes and proteins with a combined search of NCBI Entrez Gene and the BIOBASE Knowledge Library*.
PathwaysFind information on metabolic and signaling pathways with a combined search of NCBI BioSystems,
the Protein Lounge Pathway Database* and the Science STKE Database of Cell Signaling*.
ProtocolsFind experimental protocols with a combined search of Protocol Online, Cold Spring Harbor Protocols*, Current Protocols*,
Methods*, Methods in Enzymology*, Nature Methods*, Nature Protocols*, SpringerProtocols*, and STKE Protocols*.
WebFind information on the Web using Clusty, the results clustering search engine.
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Results 1-20 of about 96|
- Search for comprehensive Cap-analysis gene expression (CAGE) Basic data and Analysis results.|Find Articles Citing This Tool:
- Search for information on gene expressed in skeletal cells and their promoter sequences.|Find Articles Citing This Tool:
- Search for genome-wide annotations of regulatory sites in yeast and prokaryotes genomes.|Find Articles Citing This Tool:
- Delineate conserved non-coding blocks from upstream regions of putative orthologous gene pairs from man, mouse, rat, fugu, Mus musculus, Danio rerio, and zebrafish.|Find Articles Citing This Tool:
- Access to whole genome alignments of human, mouse, rat and fish sequences.|Find Articles Citing This Tool:
- Suite of web tools for the functional profiling of genome scale experiments.|Find Articles Citing This Tool:
- Align multiple, long genomic DNA sequences quickly and with good sensitivity.|Find Articles Citing This Tool:
- Demarcate functional regions in genomic DNA sequences using a list of tools.|Find Articles Citing This Tool:
- Predict of transcription factor binding sites or visualize sequence correspondences among long DNA sequences.|Find Articles Citing This Tool:
- Identify and visualize cis-regulatory modules in the promoter regions of a given set of potentially co-regulated genes in human genome.|Find Articles Citing This Tool:
- Search for information on tunicate promoters and regulatory elements.|Find Articles Citing This Tool:
- Generate a map of cis-regulatory elements for the Arabidopsis thaliana genome.|Find Articles Citing This Tool:
- Use comparative genomics approach to characterize gene models and identify putative cis-regulatory regions of RefSeq Gene Orthologs.|Find Articles Citing This Tool:
- Conduct genome-wide cis-regulatory module (CRM) predictions for both the human and the mouse genomes.|Find Articles Citing This Tool:
- Search for documented motifs found in plant cis-acting regulatory DNA elements.|Find Articles Citing This Tool:
- Search for information on plant cis-acting regulatory elements, transcription sites, enhancers and repressors.|Find Articles Citing This Tool:
- Search for promoter sequences for RNA polymerase II with experimentally determined transcription start sites from various plant species.|Find Articles Citing This Tool:
- Investigate the influence of mutations in regulatory gene regions onto DNA interaction with nuclear proteins.|Find Articles Citing This Tool:
- Analyze microarray and promoter data to infer transcriptional regulatory network.|Find Articles Citing This Tool:
- Perform automated comprehensive analyses of promoter regulatory motifs and the effect they exert on mRNA expression profiles.|Find Articles Citing This Tool: